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Specification Formalisms for Modern Cyber-Physical Systems (Dagstuhl Seminar 19071)

Authors: Jyotirmoy V. Deshmukh, Oded Maler, and Dejan Nickovic

Published in: Dagstuhl Reports, Volume 9, Issue 2 (2019)

Abstract

This report documents the program and the outcomes of Dagstuhl Seminar 19071 "Specification Formalisms for Modern Cyber-Physical Systems." Specifications play a major role in evaluating behaviors of modern cyber-physical systems (CPS). There is currently no specification language that allows joint description of safety, performance, security, privacy, and reliability aspects of CPS applications. The Dagstuhl seminar brought together researchers and practitioners from formal methods, control theory, machine learning and robotics to discuss the state-of-the-art and open challenges in specifying properties of modern CPS. Special attention was given to exploring the intersection of machine learning and formal specification languages, where formal specifications can serve as a bridge between the world of verification and the world of learning and data-mining.

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Jyotirmoy V. Deshmukh, Oded Maler, and Dejan Nickovic. Specification Formalisms for Modern Cyber-Physical Systems (Dagstuhl Seminar 19071). In Dagstuhl Reports, Volume 9, Issue 2, pp. 48-72, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2019)

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@Article{deshmukh_et_al:DagRep.9.2.48,
  author =	{Deshmukh, Jyotirmoy V. and Maler, Oded and Nickovic, Dejan},
  title =	{{Specification Formalisms for Modern Cyber-Physical Systems (Dagstuhl Seminar 19071)}},
  pages =	{48--72},
  journal =	{Dagstuhl Reports},
  ISSN =	{2192-5283},
  year =	{2019},
  volume =	{9},
  number =	{2},
  editor =	{Deshmukh, Jyotirmoy V. and Maler, Oded and Nickovic, Dejan},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops-dev.dagstuhl.de/entities/document/10.4230/DagRep.9.2.48},
  URN =		{urn:nbn:de:0030-drops-108581},
  doi =		{10.4230/DagRep.9.2.48},
  annote =	{Keywords: Cyber-physical systems, formal specifications, runtime verification and control}
}

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DOI: 10.4230/DagRep.8.2.88

Formal Methods for the Synthesis of Biomolecular Circuits (Dagstuhl Seminar 18082)

Authors: Yaakov Benenson, Neil Dalchau, Heinz Koeppl, and Oded Maler

Published in: Dagstuhl Reports, Volume 8, Issue 2 (2018)

Abstract

This report documents the program and the outcomes of Dagstuhl Seminar 18082 "Formal Methods for the Synthesis of Biomolecular Circuits". Synthetic biology aims for the rational bottom-up engineering of new biological functionalities. Recent years have witnessed an increase in the degree of "rationality" in the design of synthetic biomolecular circuits. With it, fewer design-build-test cycles were necessary to achieve a desired circuit performance. Most of these success stories reported the realization of logic circuits, typically operating via regulation of gene expression and/or direct manipulation of DNA sequences with recombinases, executing combinatorial and sometimes sequential logic. This was often achieved with the help of two ingredients, a library of previously well-characterized parts and some computational modeling. Hence, although circuits in synthetic biology are still by far less understood and characterized than electronic circuits, the opportunity for the formal synthesis of circuit designs with respect to a behavioral specification starts to emerge in synthetic biology.

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Yaakov Benenson, Neil Dalchau, Heinz Koeppl, and Oded Maler. Formal Methods for the Synthesis of Biomolecular Circuits (Dagstuhl Seminar 18082). In Dagstuhl Reports, Volume 8, Issue 2, pp. 88-100, Schloss Dagstuhl – Leibniz-Zentrum für Informatik (2018)

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@Article{benenson_et_al:DagRep.8.2.88,
  author =	{Benenson, Yaakov and Dalchau, Neil and Koeppl, Heinz and Maler, Oded},
  title =	{{Formal Methods for the Synthesis of Biomolecular Circuits (Dagstuhl Seminar 18082)}},
  pages =	{88--100},
  journal =	{Dagstuhl Reports},
  ISSN =	{2192-5283},
  year =	{2018},
  volume =	{8},
  number =	{2},
  editor =	{Benenson, Yaakov and Dalchau, Neil and Koeppl, Heinz and Maler, Oded},
  publisher =	{Schloss Dagstuhl -- Leibniz-Zentrum f{\"u}r Informatik},
  address =	{Dagstuhl, Germany},
  URL =		{https://drops-dev.dagstuhl.de/entities/document/10.4230/DagRep.8.2.88},
  URN =		{urn:nbn:de:0030-drops-92912},
  doi =		{10.4230/DagRep.8.2.88},
  annote =	{Keywords: Synthetic biology, Electronic design automation, Program synthesis and verification}
}

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Documents authored by Maler, Oded

Specification Formalisms for Modern Cyber-Physical Systems (Dagstuhl Seminar 19071)

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Formal Methods for the Synthesis of Biomolecular Circuits (Dagstuhl Seminar 18082)

Abstract

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